&domain_nml
 clinic_distribution_type = 'cartesian'
 ew_boundary_type = 'cyclic'
 nprocs_clinic = 30
 nprocs_tropic = 30
 ns_boundary_type = 'closed'
 tropic_distribution_type = 'cartesian'
/
&io_nml
 log_filename = 'log.131030-140305'
 lredirect_stdout = .true.
 luse_nf_64bit_offset = .true.
 luse_pointer_files = .true.
 num_iotasks = 1
/
&time_manager_nml
 accel_file = 'gx1v6_depth_accel'
 allow_leapyear = .true.
 date_separator = '-'
 dt_count =  23
 dt_option = 'steps_per_day'
 dtuxcel = 1.0
 fit_freq = 1
 iday0 = 11
 ihour0 = 0
 iminute0 = 0
 imonth0 = 1
 impcor = .true.
 isecond0 = 0
 iyear0 = 2004
 ic_filename = '/glade/p/work/hendric/inputdata/ocn/pop/gx1v6_ocn.nc'
 laccel = .false.
 runid = 'poptest4tim'
 stop_count = 1000
 stop_option = 'nyear'
 time_mix_freq = 17
 time_mix_opt = 'avgfit'
/
&grid_nml
 bathymetry_file = 'unknown_bathymetry'
 bottom_cell_file = 'unknown_bottom_cell'
 flat_bottom = .false.
 horiz_grid_file = '/glade/p/work/hendric/inputdata/ocn/pop/gx1v6/grid/horiz_grid_20010402.ieeer8'
 horiz_grid_opt = 'file'
 kmt_kmin = 3
 lremove_points = .false.
 n_topo_smooth = 0
 partial_bottom_cells = .false.
 region_info_file = 'gx1v6_region_ids'
 region_mask_file = '/glade/p/work/hendric/inputdata/ocn/pop/gx1v6/grid/region_mask_20090205.ieeei4'
 sfc_layer_opt = 'varthick'
 topography_file = '/glade/p/work/hendric/inputdata/ocn/pop/gx1v6/grid/topography_20090204.ieeei4'
 topography_opt = 'file'
 topography_outfile = '.topography_bathymetry.ieeer8'
 vert_grid_file = '/glade/p/work/hendric/inputdata/ocn/pop/gx1v6/input_templates/gx1v6_vert_grid'
 vert_grid_opt = 'file'
/
&init_ts_nml
 init_ts_file = 'ts_PHC2_jan_ic_gx1v6_20090205.ieeer8'
 init_ts_file_fmt = 'nc'
 init_ts_option = 'ccsm_continue'
 init_ts_outfile = './poptest4tim.pop_0001.h.ts_ic'
 init_ts_outfile_fmt = 'nc'
 init_ts_suboption = 'data_assim'
/
&diagnostics_nml
 cfl_all_levels = .false.
 diag_all_levels = .false.
 diag_cfl_freq = 1
 diag_cfl_freq_opt = 'nmonth'
 diag_global_freq = 1
 diag_global_freq_opt = 'nmonth'
 diag_outfile = '/glade/scratch/aliciak/poptest4tim/run/./poptest4tim.pop_0001.dd'
 diag_transp_freq = 1
 diag_transp_freq_opt = 'nmonth'
 diag_transport_file = '/glade/scratch/aliciak/poptest4tim/run/gx1v6_transport_contents'
 diag_transport_outfile = '/glade/scratch/aliciak/poptest4tim/run/./poptest4tim.pop_0001.dt'
 diag_velocity_outfile = '/glade/scratch/aliciak/poptest4tim/run/./poptest4tim.pop_0001.dv'
 ldiag_velocity = .true.
/
&budget_diagnostics_nml
 ldiag_global_tracer_budgets = .true.
/
&bsf_diagnostic_nml
 ldiag_bsf = .true.
/
&restart_nml
 even_odd_freq = 100000
 leven_odd_on = .false.
 pressure_correction = .false.
 restart_fmt = 'nc'
 restart_freq = 100000
 restart_freq_opt = 'nyear'
 restart_outfile = './poptest4tim.pop_0001.r'
 restart_start =  0
 restart_start_opt = 'nstep'
/
&tavg_nml
 ltavg_has_offset_date = .false. .false. .false.
 ltavg_ignore_extra_streams = .false.
 ltavg_nino_diags_requested = .true.
 ltavg_one_time_header = .false. .false. .false.
 ltavg_streams_index_present = .true.
 n_tavg_streams = 3
 tavg_contents = '/glade/scratch/aliciak/poptest4tim/run/gx1v6_tavg_contents'
 tavg_file_freq = 1 1 1
 tavg_file_freq_opt = 'nmonth' 'nmonth' 'once'
 tavg_fmt_in = 'nc' 'nc' 'nc'
 tavg_fmt_out = 'nc' 'nc' 'nc'
 tavg_freq = 1 1 1
 tavg_freq_opt = 'nmonth' 'nday' 'once'
 tavg_infile = './poptest4tim.pop_0001.hrestart.end'
 tavg_offset_days = 2 2 2
 tavg_offset_months = 1 1 1
 tavg_offset_years = 1 1 1
 tavg_outfile = './poptest4tim.pop_0001.h'
 tavg_start = 0 0 0
 tavg_start_opt = 'nstep' 'nstep' 'nstep'
 tavg_stream_filestrings = 'nmonth1' 'nday1' 'once'
/
&history_nml
 history_contents = '/glade/scratch/aliciak/poptest4tim/run/gx1v6_history_contents'
 history_fmt = 'nc'
 history_freq = 1
 history_freq_opt = 'never'
 history_outfile = './poptest4tim.pop_0001.hs'
/
&movie_nml
 movie_contents = '/glade/scratch/aliciak/poptest4tim/run/gx1v6_movie_contents'
 movie_fmt = 'nc'
 movie_freq = 1
 movie_freq_opt = 'never'
 movie_outfile = './poptest4tim.pop_0001.hm'
/
&solvers
 convergencecheckfreq = 10
 convergencecriterion = 1.0e-13
 maxiterations = 1000
 preconditionerchoice = 'diagonal'
 preconditionerfile = 'unknownPrecondFile'
 solverchoice = 'ChronGear'
/
&vertical_mix_nml
 aidif = 1.0
 bottom_drag = 1.0e-3
 bottom_heat_flx = 0.0
 bottom_heat_flx_depth = 1000.0e2
 convect_diff = 10000.0
 convect_visc = 10000.0
 convection_type = 'diffusion'
 implicit_vertical_mix = .true.
 nconvad = 2
 vmix_choice = 'kpp'
/
&vmix_const_nml
 const_vdc = 0.25
 const_vvc = 0.25
/
&vmix_rich_nml
 bckgrnd_vdc = 0.1
 bckgrnd_vvc = 1.0
 rich_mix = 50.0
/
&tidal_nml
 local_mixing_fraction = 0.33
 ltidal_mixing = .true.
 mixing_efficiency = 0.2
 tidal_energy_file = '/glade/p/cesmdata/cseg/inputdata/ocn/pop/gx1v6/forcing/tidal_energy_gx1v6_20090205.ieeer8'
 tidal_energy_file_fmt = 'bin'
 tidal_mix_max = 100.0
 vertical_decay_scale = 500.0e02
/
&vmix_kpp_nml
 bckgrnd_vdc1 = 0.16
 bckgrnd_vdc2 = 0.0
 bckgrnd_vdc_ban = 1.0
 bckgrnd_vdc_dpth = 1000.0e02
 bckgrnd_vdc_eq = 0.01
 bckgrnd_vdc_linv = 4.5e-05
 bckgrnd_vdc_psim = 0.13
 lcheckekmo = .false.
 ldbl_diff = .true.
 lhoriz_varying_bckgrnd = .true.
 linertial = .false.
 llangmuir = .false.
 lrich = .true.
 lshort_wave = .true.
 num_v_smooth_ri = 1
 prandtl = 10.0
 rich_mix = 50.0
/
&advect_nml
 tadvect_ctype = 'upwind3'
/
&hmix_nml
 hmix_momentum_choice = 'anis'
 hmix_tracer_choice = 'gent'
 lsubmesoscale_mixing = .true.
/
&hmix_del2u_nml
 am = 0.5e8
 lauto_hmix = .false.
 lvariable_hmix = .false.
/
&hmix_del2t_nml
 ah = 0.6e7
 lauto_hmix = .false.
 lvariable_hmix = .false.
/
&hmix_del4u_nml
 am = -0.6e20
 lauto_hmix = .false.
 lvariable_hmix = .false.
/
&hmix_del4t_nml
 ah = -0.2e20
 lauto_hmix = .false.
 lvariable_hmix = .false.
/
&hmix_gm_nml
 ah = 3.0e7
 ah_bkg_bottom = 0.0
 ah_bkg_srfbl = 3.0e7
 ah_bolus = 3.0e7
 buoyancy_freq_filename = '/glade/scratch/aliciak/poptest4tim/run/buoyancy_freq'
 buoyancy_freq_fmt = 'nc'
 const_eg = 1.2
 diag_gm_bolus = .true.
 gamma_eg = 500.0
 kappa_depth_1 = 1.0
 kappa_depth_2 = 0.0
 kappa_depth_scale = 150000.0
 kappa_freq_choice = 'once_a_day'
 kappa_isop_choice = 'bfre'
 kappa_max_eg = 2.0e7
 kappa_min_eg = 0.35e7
 kappa_thic_choice = 'bfre'
 read_n2_data = .false.
 slm_b = 0.3
 slm_r = 0.3
 slope_control_choice = 'notanh'
 transition_layer_on = .true.
 use_const_ah_bkg_srfbl = .true.
/
&mix_submeso_nml
 efficiency_factor = 0.07
 hor_length_scale = 5.0e5
 luse_const_horiz_len_scale = .false.
 time_scale_constant = 8.64e4
/
&hmix_aniso_nml
 c_para = 8.0
 c_perp = 8.0
 hmix_alignment_choice = 'east'
 lsmag_aniso = .false.
 lvariable_hmix_aniso = .true.
 smag_lat = 20.0
 smag_lat_fact = 0.98
 smag_lat_gauss = 98.0
 u_para = 5.0
 u_perp = 5.0
 var_viscosity_infile = 'ccsm-internal'
 var_viscosity_infile_fmt = 'bin'
 var_viscosity_outfile = './poptest4tim.pop_0001.hv'
 var_viscosity_outfile_fmt = 'nc'
 vconst_1 = 0.6e7
 vconst_2 = 0.5
 vconst_3 = 0.16
 vconst_4 = 2.e-8
 vconst_5 = 3
 vconst_6 = 0.6e7
 vconst_7 = 45.0
 visc_para = 50.0e7
 visc_perp = 50.0e7
/
&state_nml
 state_choice = 'mwjf'
 state_file = 'internal'
 state_range_freq = 100000
 state_range_opt = 'enforce'
/
&baroclinic_nml
 reset_to_freezing = .false.
/
&ice_nml
 ice_freq = 100000
 ice_freq_opt = 'coupled'
 kmxice = 1
 lactive_ice = .true.
/
&pressure_grad_nml
 lbouss_correct = .false.
 lpressure_avg = .true.
/
&topostress_nml
 ltopostress = .false.
 nsmooth_topo = 0
/
&forcing_ws_nml
 ws_data_inc = 24.
 ws_data_renorm = 10., 19*1.
 ws_data_type = 'none'
 ws_file_fmt = 'bin'
 ws_filename = 'unknown-ws'
 ws_interp_freq = 'every-timestep'
 ws_interp_inc = 72.
 ws_interp_type = 'linear'
/
&forcing_shf_nml
 luse_cpl_ifrac = .true.
 shf_data_inc = 24.
 shf_data_renorm(3) = 0.94
 shf_data_type = 'monthly'
 shf_file_fmt = 'bin'
 shf_filename = '/glade/p/cesmdata/cseg/inputdata/ocn/pop/gx1v6/forcing/shf_mm_all_85-88_20010308.ieeer8'
 shf_formulation = 'partially-coupled'
 shf_interp_freq = 'every-timestep'
 shf_interp_inc = 72.
 shf_interp_type = 'linear'
 shf_restore_tau = 30.
 shf_strong_restore = 0.0
 shf_strong_restore_ms = 92.64
 shf_weak_restore = 0.
/
&forcing_sfwf_nml
 ladjust_precip = .true.
 lfw_as_salt_flx = .true.
 lms_balance = .false.
 lsend_precip_fact = .true.
 sfwf_data_inc = 24.
 sfwf_data_renorm = 0.001, 19*1.
 sfwf_data_type = 'monthly'
 sfwf_file_fmt = 'bin'
 sfwf_filename = '/glade/p/cesmdata/cseg/inputdata/ocn/pop/gx1v6/forcing/sfwf_mm_PHC2_salx_flxio_20090205.ieeer8'
 sfwf_formulation = 'partially-coupled'
 sfwf_interp_freq = 'every-timestep'
 sfwf_interp_inc = 72.
 sfwf_interp_type = 'linear'
 sfwf_restore_tau = 30.
 sfwf_strong_restore = 0.0
 sfwf_strong_restore_ms = 0.6648
 sfwf_weak_restore = 0.0115
/
&forcing_pt_interior_nml
 pt_interior_data_inc = 24.
 pt_interior_data_renorm = 20*1.
 pt_interior_data_type = 'none'
 pt_interior_file_fmt = 'bin'
 pt_interior_filename = 'unknown-pt_interior'
 pt_interior_formulation = 'restoring'
 pt_interior_interp_freq = 'every-timestep'
 pt_interior_interp_inc = 72.
 pt_interior_interp_type = 'linear'
 pt_interior_restore_file_fmt = 'bin'
 pt_interior_restore_filename = 'unknown-pt_interior_restore'
 pt_interior_restore_max_level = 0
 pt_interior_restore_tau = 365.
 pt_interior_variable_restore = .false.
/
&forcing_s_interior_nml
 s_interior_data_inc = 24.
 s_interior_data_renorm = 20*1.
 s_interior_data_type = 'none'
 s_interior_file_fmt = 'bin'
 s_interior_filename = 'unknown-s_interior'
 s_interior_formulation = 'restoring'
 s_interior_interp_freq = 'every-timestep'
 s_interior_interp_inc = 72.
 s_interior_interp_type = 'linear'
 s_interior_restore_file_fmt = 'bin'
 s_interior_restore_filename = 'unknown-s_interior_restore'
 s_interior_restore_max_level = 0
 s_interior_restore_tau = 365.
 s_interior_variable_restore = .false.
/
&forcing_ap_nml
 ap_data_inc = 1.e20
 ap_data_renorm = 20*1.
 ap_data_type = 'none'
 ap_file_fmt = 'bin'
 ap_filename = 'unknown-ap'
 ap_interp_freq = 'never'
 ap_interp_inc = 1.e20
 ap_interp_type = 'nearest'
/
&coupled_nml
 coupled_freq = 1
 coupled_freq_opt = 'nday'
 qsw_distrb_opt = 'cosz'
/
&sw_absorption_nml
 chl_file_fmt = 'bin'
 chl_filename = '/glade/p/cesmdata/cseg/inputdata/ocn/pop/gx1v6/forcing/chl_filled_20061230.ieeer8'
 chl_option = 'file'
 jerlov_water_type = 3
 sw_absorption_type = 'chlorophyll'
/
&transports_nml
 lat_aux_begin = -90.0
 lat_aux_end = 90.0
 lat_aux_grid_type = 'southern'
 moc_requested = .true.
 n_heat_trans_requested = .true.
 n_lat_aux_grid = 180
 n_salt_trans_requested = .true.
 n_transport_reg = 2
 transport_reg2_names = 'Atlantic Ocean', 'Mediterranean Sea', 'Labrador Sea', 'GIN Sea', 'Arctic Ocean', 'Hudson Bay'
/
&context_nml
 b4b_flag = .false.
 lccsm = .true.
 lccsm_control_compatible = .false.
 lcoupled = .true.
/
&overflows_nml
 overflows_diag_outfile = '/glade/scratch/aliciak/poptest4tim/run/./poptest4tim.pop_0001.do'
 overflows_infile = '/glade/scratch/aliciak/poptest4tim/run/gx1v6_overflow'
 overflows_interactive = .true.
 overflows_on = .true.
 overflows_restart_type = 'ccsm_continue'
 overflows_restfile = './poptest4tim.pop_0001.ro'
/
&niw_nml
 lniw_mixing = .false.
 niw_boundary_layer_absorption =  0.7
 niw_energy_file = '/glade/p/cesmdata/cseg/inputdata/ocn/pop/gx1v6/forcing/niw_gx1v6_20100915.ieeer8'
 niw_energy_file_fmt = 'bin'
 niw_energy_type = 'blke'
 niw_local_mixing_fraction = 0.5
 niw_mix_max = 100.0
 niw_mixing_efficiency = 0.2
 niw_obs2model_ratio = 2.0
 niw_vert_decay_scale = 2000.0e02
/
&passive_tracers_on_nml
 cfc_on = .false.
 ecosys_on = .false.
 iage_on = .true.
 moby_on = .false.
/
&iage_nml
 init_iage_init_file = 'same_as_TS'
 init_iage_option = 'ccsm_continue'
/
